FFPE RNA quality assessment with the Agilent Bioanalyzer and TapeStation Systems

16 Jun 2025

In this application note, Agilent Technologies highlights the capabilities of both the Agilent Bioanalyzer and TapeStation systems in analyzing FFPE RNA samples using the DV200 score. The results provide a comparison between the DV200 scores from each system.

4200 TapeStation Instrument

Agilent Technologies

The Agilent 4200 TapeStation system is an established automated electrophoresis tool for DNA and RNA sample quality control. Fully automated sample processing enables the unattended analysis of size, concentration and integrity. Choose any sample number between 1 and 96 and analyze at constant cost per sample.

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2100 Bioanalyzer

Agilent Technologies

The Agilent 2100 Bioanalyzer is a microfluidics-based platform for sizing, quantification and quality control of DNA, RNA, proteins and cells on a single platform. Results are delivered within 30-40 minutes in automated, high quality digital data. The Agilent 2100 Bioanalyzer system provides sizing, quantitation and quality control of DNA, RNA, proteins and cells on a single platform, providing high quality digital data.A unique feature of the Agilent 2100 bioanalyzer is that it can be used for both electrophoretic separation and flow cytometric analysis of cell fluorescence parameters. This versatility makes the Agilent 2100 bioanalyzer an indispensable tool for the molecular biologist and biochemist.2100 Bioanalyzer Features: Ready-to-use assays and pre-packaged reagent kits Minimal sample consumption (1-4 µL) and results within 30 minutes Replaceable electrode cartridge for contamination-free switch of methods Improved assay accuracy and precision Comparable results from lab to lab Digital data for convenient analysis, archiving and storage Various data-display options as gel view, electropherograms and tables Easy to use with simplified sample comparison Minimum exposure to hazardous materials Supports compliance with 21 CFR Part 11

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