Dymension 2D Gel Analysis Software used at Prestigious Veterinary Institute to detect proteins associated with immunity to parasitic gastroenteritis in sheep

14 Oct 2008
Emily
Student / Graduate

Product news

Syngene, a world-leading manufacturer of image analysis solutions, is delighted to announce, Dymension, its unrivalled software for the analysis of 2D protein gels, is being used at one of Europe’s foremost veterinary schools, the Royal (Dick) School of Veterinary Studies in Scotland, to rapidly and accurately identify global changes in protein expression associated with immunity to parasitic gastroenteritis, the most commonly diagnosed systemic disease of sheep in the UK.

BBSRC funded (BB/E01867X/1) researchers at the Royal (Dick) School of Veterinary Studies are using Dymension software to analyse 2D gels of protein extracts from the gastrointestinal mucosa of sheep, infected with the parasitic nematode Teladorsagia circumcincta, to identify key proteins involved in the immune exclusion of this, and related parasites. The research could lead to a better understanding of how natural immunity to these parasites occurs and could provide information to help design better vaccines and therapies to prevent this disease.

Dr Jeremy Brown, a Research Fellow at the Royal (Dick) School of Veterinary Studies commented: “We need to align gels and actively cluster data sets from large groups of animals to look at all the proteins associated with immunity. We have previously used a variety of proteomics software but found these tasks difficult and time consuming to perform. The latest version of Dymension has taken these complicated activities and has nicely simplified them into a workflow method, allowing us to generate our data in a very straightforward and rigorous way.”

Dr Brown added: “Using Dymension, we’ve analysed 2D gel images to compare the mucosal proteome from 24 different sheep and have detected 951 different spots, with results across gels being surprisingly consistent. We’re in the process of analysing selected spots by MALDI-TOF to identify which proteins are involved in immunity.”

Laura Sullivan, Syngene’s Divisional Manager stated: “We have spent many hours developing rapid gel alignment methods and spot significance tools. It is therefore very exciting to find researchers at the Royal (Dick) School of Veterinary Studies can perform these tasks with ease and highlights the time saving benefits Dymension can provide any proteomics project.”

Links

Tags

OligonucleotidesOligonucleotides are small nucleic acid polymers, usually less than 20 bases in length. Oligonucleotides can be made via enzymatic cleavage or more commonly by chemical synthesis with polymerases. Their use includes FISH, southern blots, microarrays and as primers in PCR. High fidelity synthesis kits and detection systems are available for easy production and detection, respectively.ProteomicsProteomics is the systemic bioinformatics study of proteins and amino acids, including their structure, size, function and identification. Tools used in proteomics include chromatography, blotting and gels, protein arrays, mass spectrometry and ELISA and associated analysis software. Analyzers and proteomic systems should be sensitive, high resolution, fast and may be automated for high-throughput.Gel Doc / Image AnalysisGel documentation (gel doc) or gel imaging systems are used for the analysis of proteins, antibodies and nucleic acid immobilized in polyacrylamide or agarose gels, membranes or microarrays. Explore a range of a gel imaging systems, densitometers, scanners, transilluminators or UV lamp + CCD cameras for your image analysis solutions. Colorimetric, fluorescent and/or radioisotopic samples can be visualized and documented for further analysis. See gel doc / Image analysis software for quantitative 1D and 2D analysis of your samples. Find the best gel doc / image analysis products in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.
Dymension 2D Gel Analysis Software used at Prestigious Veterinary Institute to detect proteins associated with immunity to parasitic gastroenteritis in sheep