Uncover the cutting-edge technologies in the field of microscopy

Explore AI-powered image analysis, Raman microscopy and energy-dispersive X-ray spectrometry and how they can be utilized across a range of scientific applications

7 Aug 2023
Georgina Wynne Hughes
Editorial Assistant

Editorial article

Microscopy enables scientists to look beyond what is visible to the human eye, unravelling the hidden characteristics of living and non-living things. What started with a simple light microscope, has advanced beyond imagining in recent years. Now scientists have technology choices including 3D electron microscopes, scanning transmission electron microscopy, corelative light and electron microscopy, and electron backscatter diffraction (EBSD).

AI within the microscopy field: A second pair of eyes

Artificial intelligence has the potential to revolutionize microscopy image analysis. By training ‘smart microscopy’ tools to achieve reliable object classification, image classification, segmentation, image restoration, super resolution, and virtual staining, scientists working in fields such as patient diagnostics and cancer research are benefitting from higher resolution and more immediate insights.

An introduction to AI image analysis in microscopy

Over the past four years, there has been a trend towards microscopists using AI- based solutions for image acquisition optimization (smart microscopy), object classification, image classification, segmentation, restoration, super resolution, and virtual staining.

In this educational webinar, AI expert, Dr. Quyen Tran, Leica Microsystems, discusses the basic concepts and terminology of AI, defining some of the key terminology that can be hard to decipher for non-AI experts. Sharing how machine and deep learning can be used for microscopy applications, Dr. Tran demonstrates how we can extract further insights from our image acquisition and analysis.

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ML pixel classifier training image slide from the webinar titled ‘An introduction to AI image analysis in microscopy’
ML pixel classifier training image slide from the webinar titled ‘An introduction to AI image analysis in microscopy’, led by AI expert, Dr. Quyen Tran.

AI-based image analysis algorithms

Medical imaging generates vast amounts of data that are impossible to analyze manually. With advances in AI, researchers are now exploring how this technology can be used to manage and simplify the analysis of large 3D microscopy data sets.

In this article, Jianxu Chen, head of the new Analysis of Microscopic BIOMedical Images (AMBIOM*) group at ISAS discusses how his research group is developing scalable, AI-based image analysis algorithms to support disease studies.

Discover Chen’s research goals, find out how machine learning and AI are helping to overcome technological challenges, and find out the potential impact his team’s work will have in the field of healthcare.

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3D rendering of a human-induced pluripotent stem cell (hiPSC) with its cell membrane (orange), nucleus (yellow) and nucleolus (green).
3D rendering of a human-induced pluripotent stem cell (hiPSC) with its cell membrane (orange), nucleus (yellow) and nucleolus (green). Chen’s research hopes to develop AI to enable quantitative cell biology research on the scale of millions of cells such as these.

Analytical microscopy: Full characterization of samples

Full characterization of organic and inorganic samples provides a better understanding of their properties and structure. Combining different microscopic techniques and pushing the boundaries of current technologies can achieve full characterization which helps research and applications in different sectors including pharmaceutical, environmental, and industrial.

Micro-XRF & Raman microscopy: A winning combo

In this webinar Thibault Brulé and Jocelyne Marciano from HORIBA Scientific demonstrate how the combination of micro-XRF and Raman microscopy can be used to fully characterize the organic and inorganic layout of samples like tablets, rocks, or pollutant particles on filters.

Understand how elemental and molecular characterization can be combined to help solve issues across many applications.

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Slide showing elemental distribution from the webinar ‘Micro-XRF & Raman Microscopy: A winning combo for your elemental and chemical analyses’
Slide showing elemental distribution from the webinar ‘Micro-XRF & Raman Microscopy: A winning combo for your elemental and chemical analyses’

Electron backscatter diffraction: Moving toward the mainstream

In this article, Dr. Pat Trimby, EBSD Product Manager at Oxford Instruments discusses the advances in electron backscatter diffraction (EBSD) that will make it more accessible for researchers in different fields such as biomaterials and green energy. The article explains how the use of high-speed complementary metal oxide semiconductor (CMOS) technology in EBSD detectors instead of the standard charge-coupled device (CCD) sensors, can produce higher resolution images at a high speed.

Discover how the combination of EBSD with energy-dispersive X-ray spectrometry (EDS), provides comprehensive analysis of a sample’s physical properties and how this can be applied across different industries and research areas, from metals research to advanced manufacturing techniques, renewable energy, microelectronics, and geological research.

A dedicated EBSD learning center is available from Oxford Instruments for researchers that want to enhance their understanding of the advancements of the technology and its future applications.

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Typical EBSD map showing the internal deformation within grains in a partially recrystallized Ni sample, as well as the distribution of coincident site lattice boundaries.
Typical EBSD map showing the internal deformation within grains in a partially recrystallized Ni sample, as well as the distribution of coincident site lattice boundaries. This dataset took 15 minutes to collect, containing >3 million individual measurements. Image provided by Dr. Pat Trimby.

Super-resolution imaging: Unfold the secrets of biology

Explore the power of super-resolution microscopy: Unveiling the unseen

In this interview, with Winfried Wiegraebe, Ph.D., Product Manager of Super-Resolution Microscopy at Bruker, discover the benefits of this super-resolution microscopy, understanding how it works and its applications in different research fields, as well as learning about one of Bruker’s super-resolution microscopes.

Wiegraebe discusses single-molecule localization microscopy (SMLM) and its ability to collect data from individual molecules within a sample, overcoming the diffraction limit of conventional microscopes producing super resolution images with the most intricate details.

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Step into the future of microscopy

The future of microscopy: Latest innovations from Leica Microsystems

Watch this video to learn about the key features and research applications of the microscopy product portfolio available from Leica Microsystems – from the ‘world’s first imaging Microhub’ to cryo-immobilization of aqueous samples.

Watch the full video interview.

A computer screen showing an image of cells being analyzed with Microhub software.
AI-powered image analysis with the world’s first imaging Microhub from Leica Microsystems


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Raman SpectroscopyRaman spectroscopy is used to discern the vibrational and rotational states of molecules and hence the chemical composition of a sample by measuring the inelastic scattering of monochromatic light. Explore a range of Raman spectrometers, including handheld/portable Raman spectrometers for QC/QA labs and in situ spectrometers for processes. Conduct Raman imaging for microanalysis of mixed samples using a Raman microscope. Raman spectrographs are also available. Find the best Raman spectroscopy products in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.X-Ray Diffraction and SpectroscopyX-Ray diffraction & spectroscopy are used in material characterization to discern the structure and elemental composition of a sample. X-Ray diffractometers (XRD) are superior instruments in elucidating the dimensional atomic structure of crystalline materials, including powders, thin films and single crystals. For large unit cells or ordered macromolecules, consider small-angle X-ray scattering (SAXS). X-ray spectroscopic techniques include X-ray fluorescence (XRF) and X-ray photoelectron spectroscopy (XPS), both providing simple and accurate methods for determining the elemental composition of a material. Energy dispersive (EDXRF) and wavelength dispersive (WDXRF) XRF spectrometers are available, as well as handheld/portable devices. High-resolution, 3D microstructure characterization of materials can be achieved with X-ray microscopes combining sub-micron resolution imaging with 3D computed tomography. Find the best XRD and XRF spectrometers in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Light MicroscopyLight microscopes or optical microscopes are used to visualize microscale objects under magnification, including cells, clinical specimens and materials. Lab equipment for light microscopy includes confocal microscopes, fluorescence microscopes, zoom and stereo microscopes. Microscope slides and imaging reagents are available for visualizing samples, as well as various microscope stages and incubators for large or temperature-sensitive samples. Find the best light microscopes in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Artificial Intelligence / Machine LearningArtificial intelligence (AI) and machine learning (ML) are transformative technologies used to analyze complex data, identify patterns, and make data-driven predictions across diverse scientific fields. Automate the analysis of large or complex data sets using AI algorithms and leverage machine learning models to improve diagnostics, accelerate drug discovery, and refine experimental design. Discover the best AI/ML software, platforms, and analytical tools in our peer-reviewed product directory: compare features, read customer reviews, and request pricing directly from manufacturers.MicroscopyMicroscopy is a technique used to observe small objects in detail, from cells to materials, using light or electron microscopes. It enables researchers to examine structures with high resolution, aiding in fields such as biology, medicine, and materials science. With advanced microscopy techniques, scientists can gain insights into cellular processes, tissue structures, and material properties. Explore the best microscopy solutions in our peer-reviewed product directory, compare products, read customer reviews, and get pricing directly from manufacturers.Super Resolution Microscopy