New Software Allows Human Genome Assembly on Desktop Computer in Less than a Day

1 Feb 2011
Sarah Sarah
Marketing / Sales

Product news

DNASTAR® today announced a breakthrough in sequence assembly software with SeqMan NGen® 3, now available. Using patent-pending internally invented algorithms, SeqMan NGen 3 represents the first software tool to assemble a human genome at a normal depth of coverage on a desktop computer in less than a day.

Tom Schwei, Vice President and General Manager of DNASTAR, stated, “We are very pleased to make this tool available to life scientists for assembling and analyzing data from any size genome on a desktop computer. This software release continues the long-term vision we’ve sustained over our more than 25-year history – providing easy to use sequence assembly and analysis software for all life scientists at an affordable cost on their desktop computer.”

SeqMan NGen assembles data from all next-generation sequencing technologies and it is well positioned to meet the needs of scientists who choose to use third-generation technologies as well. The product includes a very flexible Graphical User Interface that leads scientists through experimental set-up for a wide variety of sequence assembly and analysis workflows.

Schwei also commented, “The strength of SeqMan NGen 3 is its ability to assemble data quickly and accurately on a desktop computer. Bacterial genomes are routinely assembled in less than a minute, while reference-guided human genome data takes less than a day to assemble.”

SeqMan NGen 3 is being made available with its companion SeqMan Pro analysis software that supports Bayesian SNP identification and facile scanning of genomic data in BAM format on a desktop computer.

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Genome AnalysisGenomics, the study of genomes, includes functional genomics, evolutionary genomics and comparative genomics. There are many genomic technologies such as DNA sequencing of whole genomes, computational biology and bioinformatics. DNA and nucleic acids must be isolated and concentrated from cells for analysis with kits, automated analyzers and software. Other useful technologies for studying genomics include PCR, microarrays and electrophoresis.Data AnalysisData analysis hardware and software is available to make data processing straight-forward yet powerful. Data software can be used for math and stats, technical graphing and image analysis. In addition, software is available for specific data analysis of electrophoresis, densitometry, ELISA and DNA sequencing.Integration ServicesIncorporate lab systems, software and equipment with integration services.Data MiningData mining is an important process for extracting information, patterns and trends from data. Data mining software, databases, reference materials and storage packages are available to process lab data.DNA SequencingDNA sequencing, such as sanger sequencing, is a biological technique that determines the precise order of nucleotide bases in a fragment or template of DNA. DNA sequencers and genetic analyzers are based on capillary electrophoresis, where labeled DNA fragments are electrophoretically separated by size as they migrate through a polymer. Find the best DNA sequencing products, including DNA sequencing kits, genomic libraries and genetic identity kits in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.
New Software Allows Human Genome Assembly on Desktop Computer in Less than a Day