Ludesi's 2D Gel Image Analysis Enabled Discovery of Potential Therapeutic Targets for Melanoma Tumors

14 Oct 2008
Samantha Rosoman
Campaign Coordinator

Product news

Ludesi Corporation, developer of the award-winning Ludesi Image Analysis Service and the Ludesi REDFIN software for two-dimensional electrophoresis gels, today announced that researchers at the University of Pennsylvania in Philadelphia, National Eye Institute at National Institutes of Health in Bethesda Maryland, and the University of North Carolina at Chapel Hill have been able to discover potential therapeutic targets for melanoma tumors using Ludesi's 2D gel image and data analysis.

Melanoma has for several decades been amongst the fastest growing cancer types in the western world. In this project the researchers at the University of Pennsylvania, National Institutes of Health and Chapel Hill, performed kinetic proteomics of melanoma tumors as they progress in vivo to better understand the complex interactions between the tumors and their native environments.

Proteins from the tumors were separated on 2D gels, and the resulting images were sent to Ludesi for analysis using their proprietary image analysis system. Univariate and multivariate statistical tests were used to identify trends and co-regulation in protein expression. The results were validated by immunohistochemistry and immunoblots.

An important finding in the study was the dynamic nature of melanomas which highlights the need to study the disease progression at multiple time points for biomarker and therapeutic target discovery. The researchers also identified several potential therapeutic targets for cancer therapy that had been previously unknown.

"It is great to see a success case like this. Our congratulations to the researchers who have done a tremendous job over the last couple of years. It is good to hear from yet another group that our technology made such a positive difference in their work" commented Ludesi's CEO Ola Forsstrom-Olsson.

Links

Tags

ProteomicsProteomics is the systemic bioinformatics study of proteins and amino acids, including their structure, size, function and identification. Tools used in proteomics include chromatography, blotting and gels, protein arrays, mass spectrometry and ELISA and associated analysis software. Analyzers and proteomic systems should be sensitive, high resolution, fast and may be automated for high-throughput.Data AnalysisData analysis hardware and software is available to make data processing straight-forward yet powerful. Data software can be used for math and stats, technical graphing and image analysis. In addition, software is available for specific data analysis of electrophoresis, densitometry, ELISA and DNA sequencing.Gel Doc / Image AnalysisGel documentation (gel doc) or gel imaging systems are used for the analysis of proteins, antibodies and nucleic acid immobilized in polyacrylamide or agarose gels, membranes or microarrays. Explore a range of a gel imaging systems, densitometers, scanners, transilluminators or UV lamp + CCD cameras for your image analysis solutions. Colorimetric, fluorescent and/or radioisotopic samples can be visualized and documented for further analysis. See gel doc / Image analysis software for quantitative 1D and 2D analysis of your samples. Find the best gel doc / image analysis products in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Chem / BioinformaticsCheminformatics and bioinformatics are computational techniques used in chemistry and biology, respectively, for data acquisition, processing and storage. Cheminformatics focuses on compound information, whereas bioinformatics is mainly applied to analysis and modeling of genomics, genetic and sequencing information. Hardware and software is available for data acquisition, analysis, management and storage.