Spatial phenotyping without compromise in plex, resolution, or throughput

How ground-breaking innovative approaches in spatial phenotyping can deliver high-throughput single-cell resolution within the context of fully intact tissues samples

5 Mar 2024

Spatial phenotyping without compromise

Biological systems are complex, and full spatial understanding of tissue heterogeneity and cellular microenvironments has been hampered by trade-offs that are forced by the available analytical technologies.

All of which has given rise to the concept of the ‘iron triangle’ – the hard problem of improving resolution, plex and throughput simultaneously in one analytical solution.

But the world is set to change with the advent of new spatial phenotyping approaches that enable viewing, characterization and quantification of cells by lineage and variant with single-cell resolution, all in the context of an intact tissue sample.

From capturing tumor heterogeneity and validating cancer models, to teasing out how the cellular microenvironment impacts disease progression and treatment response, this guide will explain how spatial phenotyping can deliver advances in automation, efficiency, tunability, and speed that are set to transform how we study tissue biology.

PhenoImager® Fusion

Akoya Biosciences

The PhenoImager ® ; Fusion system is a whole-slide, single-cell resolution, ultrafast multispectral imager ideal for standard throughput brightfield and fluorescence imaging applications. This imaging platform can be integrated with the PhenoCycler ® ; system (formerly CODEX ® ) for ultra high-plex spatial discovery at scale.

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PhenoCycler®

Akoya Biosciences

The PhenoCycler ® is a cutting-edge fluidics control unit that integrates with the PhenoImager Fusion imaging platform creating the fastest spatial biology solution with unparalleled throughput. 

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Find the best cells for your research in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Flow Cytometry / Cell CountingFlow cytometers are used to count, sort and examine multiple characteristics of cells. Other cell analysis equipment includes image cytometers, cell counters, fluorescence-activated cell sorters (FACS), magnetic-activated cell sorters (MACS), and a range of flow cytometry assay kits. Flow cytometers can reveal information on cell viability, cell proliferation, apoptosis and cell cycle progression, as well as identify cell populations and intracellular or cell-surface molecules. Additionally, some flow cytometers, known as FACS, have an additional sorting function after analysis. Cell counters and image cytometers count live and dead cell populations and can also conduct cell proliferation assays. 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Biomarkers include genetic markers, cell surface markers such as antigens, antibodies or receptors and secreted molecules such as cytokines. An assay system is required for identification of biomarkers. :Light MicroscopyLight microscopes or optical microscopes are used to visualize microscale objects under magnification, including cells, clinical specimens and materials. Lab equipment for light microscopy includes confocal microscopes, fluorescence microscopes, zoom and stereo microscopes. Microscope slides and imaging reagents are available for visualizing samples, as well as various microscope stages and incubators for large or temperature-sensitive samples. 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Browse our peer-reviewed product directory to find the best cell biology tools and equipment, compare products, check customer reviews, and get pricing directly from manufacturers.