Promega's new workflow allows COVID-19 testing labs to skip RNA extraction

XpressAmp Direct Amplification Reagents facilitate RNA extraction-free sample preparation that is automation-friendly

12 Mar 2021
Diane Li
Assistant Editor

Promega Corporation has released XpressAmp™ Direct Amplification Reagents that facilitate RNA extraction-free sample preparation that is automation-friendly. With this innovation, laboratories testing for COVID-19 have a new tool that enables them to skip the potentially bottlenecked RNA extraction step of the workflow and move directly to polymerase chain reaction (PCR) amplification.

The simple, direct amplification workflow involves three key steps:

Collect and store sample – use common nasopharyngeal swabs in transport media.

Lyse sample – mix sample and XpressAmp™ Lysis Buffer (1:1) and incubate for 10 minutes at room temperature.

Amplify and analyze – add lysed sample to RT-qPCR containing XpressAmp™ Solution.

Viral inactivation studies were performed on behalf of Promega Corporation by Dr. Thomas Klimkait from the Molecular Virology Group, Department of Biomedicine, University of Basel, Switzerland. The studies found that the XpressAmp™ Lysis Buffer successfully inactivated the SARS-CoV-2 virus and the results were presented at the 2020 American Society of Human Genetics (ASHG) virtual meeting.

Promega, a global manufacturer of reagents, assays, and benchtop instruments essential for COVID-19 research, drug development, and diagnostic testing, including RNA extraction, increased production dramatically since the start of the pandemic to address a 10-fold increase in demand. Reagent manufacturers worldwide responded similarly. Still, supply and demand gaps remain, particularly around RNA extraction.

Promega sought a solution that leverages the company’s more than 40 years of experience in both sample preparation and amplification, especially its work with challenging samples such as forensic crime scene evidence. The result is a direct amplification method that simplifies and accelerates time to qPCR results.

"We are constantly exploring ways to apply our scientific and manufacturing expertise to help labs address the unprecedented demands they are facing for COVID-19 testing. Offering an option to skip RNA extraction and move directly to PCR amplification not only saves time, but it also addresses potential supply constraints since the many buffers and optimization reagents needed for extraction and wash steps in a typical PCR workflow are no longer needed,” says Promega Chief Medical Officer Ashley Anderson.

XpressAmp™ Direct Amplification Reagents are also available as a custom product that can be adjusted in numerous ways to suit a laboratory’s specific needs. Options include purchasing in bulk, changing the dispense size, or reformatting and relabeling.

Since January 2020, the company has provided enough reagents and enzymes to enable testing an estimated 700 million samples for SARS-CoV-2 worldwide. Promega components currently support approximately 30 COVID-19 test kits around the world.

  • Promega Maxwell® RSC 48 and CSC 48 instruments and the Promega Maxwell® RSC Viral Total Nucleic Acid Purification Kit are in the US Centers for Disease Control’s (CDC) Influenza SARS-CoV-2 (Flu SC2) Multiplex Assay for emergency use.
  • These same products, along with the Promega GoTaq® Probe 1-Step RT-qPCR System, are also in the CDC 2019-Novel Coronavirus Real-Time RT-PCR Diagnostic Panel for emergency use.

Promega tools used for COVID-19 applications are a small subset of the 4,000 products Promega manufactures and distributes globally, serving research, pharma, clinical, forensic, and applied markets. These tools are used for a myriad of applications in human health, disease, genetic identity, drug development, clinical diagnostics, and more.

Do you use Promega products in your lab? Write a review today for your chance to win a $400 Amazon Gift Card>>

GoTaq® Probe 1-Step RT-qPCR System

Promega Corp.

  The GoTaq® Probe 1-Step RT-qPCR System is optimized for quantitative PCR assays in the hydrolysis probe detection format. The system enables detection and relative quantification of RNA expression levels using a one-step RT-qPCR method, combining GoScript™ Reverse Transcriptase and GoTaq® Probe qPCR Master Mix in single-step real-time amplification reactions. The GoScript™ RT Mix for 1-Step RT-qPCR (50X) combines optimized amounts of GoScript™ Reverse Transcriptase, RNasin® Plus RNase Inhibitor and additives to enhance single-step reactions. The GoTaq® Probe qPCR Master Mix is provided as a ready-to-use, stabilized 2X formulation that includes all components for qPCR (except template, primers and probe). This master mix does not contain a reference dye; however, a separate tube of carboxy-X-rhodamine (CXR) reference dye is included with this system, allowing users to add reference dye to amplification reactions if desired. The GoTaq® Probe qPCR Master Mix is designed to provide resistance to a wide range of PCR inhibitors. This formulation uses antibody-mediated hot-start chemistry, allowing reaction setup to be performed at room temperature. The master mix also employs rapid hot-start activation and processive enzymes, making it compatible with both standard and fast instrument cycling programs. Features - Benefits • Superior Performance: Sensitive detection on any real-time instrument • Enhanced Stability: Exceptional room-temperature setup makes it suitable for automation and high-throughput detection • Versatility: Compatible with both fast and standard cycling methods • Robustness: High-efficiency, full-length cDNA synthesis in the presence of inhibitors • Confidence: The Promega PCR Performance Guarantee Applications • Sensitive sequence detection and quantification • Gene expression analysis • Detection of sequence variants • Fluorescent detection  

(1)

Links

Tags