Counting isolated nuclei from mouse brain

19 Mar 2021

Nuclei isolated from tissue samples such as a brain have high levels of debris, which in turn can affect downstream single-cell sequencing workflows and result in low-quality libraries or failed sequencing experiments.

In this application note, DeNovix demonstrates how dual fluorescence counting using the CellDrop™ FL Automated Cell Counter can clearly distinguish nuclei, unlysed intact cells, and debris by acridine orange / propidium iodide (AO/PI) counting. Download the full note below to learn how this protocol was used to accurately count isolated nuclei from mouse brain.

CellDrop™ Automated Cell Counters

DeNovix

Reduce consumable costs and improve lab sustainability with patented DirectPipette™ technology, or use slide mode for ultimate measurement flexibility. The CellDrop features dual fluorescence and brightfield optics, variable height sample chamber to make cell counting fast, simple, and reproducible.

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Counting isolated nuclei from mouse brain